Spaghetti Squash Gratin — Primal & Gluten Free Recipe

Warning! This Spaghetti Squash Gratin includes dairy. If you follow a strictly dairy-free diet, this recipe may not be for you—it’s a decadent, hard-to-resist dish.

PaleoSpirit.com Spaghetti Squash Gratin

If you’re still reading, I’ll assume you enjoy dairy occasionally. Some people describe diets that include limited dairy as “primal,” so this recipe is best called a Primal Spaghetti Squash Gratin.

spaghetti squash gratin by PaleoSpirit.com

The star dairy in this gratin is one of the finest melting cheeses: Gruyère.

Gruyere cheese for primal spaghetti squash gratin

Gruyère is a classic Swiss cheese with a creamy, nutty, and slightly earthy flavor—it’s the same cheese that makes French onion soup irresistible. When used in a gratin, authentic Swiss Gruyère offers a richer, more complex taste than many domestic substitutes, and a little goes a long way.

Spaghetti Squash Gratin

This gratin is especially comforting on cool autumn and winter evenings. The spaghetti squash retains a slight bite while the nutmeg highlights the Gruyère’s warmth. Serve it alongside steak and a green salad or as a cozy substitute for traditional macaroni and cheese.

Primal Spaghetti Squash Gratin

Spaghetti Squash Gratin (Primal & Gluten-free)

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Gratin made with spaghetti squash — a flavorful, comforting side dish.

  • Author: Lea Valle
  • Category: side

Ingredients

  • 1 spaghetti squash
  • 2 tablespoons butter
  • 1 medium onion, finely diced
  • 3/4 cup plain Greek yogurt
  • 1 1/4 cup grated Gruyère cheese (divided)
  • 1 1/2 – 2 teaspoons sea salt (to taste)
  • 1/2 teaspoon black pepper
  • 1/4 teaspoon grated nutmeg

Instructions

  1. Preheat the oven to 375°F (190°C).
  2. Cut the spaghetti squash in half lengthwise and place rind side up on a baking sheet. If the squash is hard to cut, microwave each half for a couple of minutes to soften slightly. Pour about 1/4 inch of water into the pan, then bake for 45 minutes. Allow the squash to cool until it’s safe to handle.
  3. Scoop out and discard the seeds and membranes from each half.
  4. Use a fork to shred the flesh of the squash into strands, then set aside.
  5. In a medium or large skillet, melt the butter over medium heat.
  6. Add the finely diced onion and sauté until translucent, about 10–12 minutes. Stir in the salt, pepper, and nutmeg.
  7. Stir in the Greek yogurt, shredded spaghetti squash, and 3/4 cup of the grated Gruyère. Heat for a couple of minutes until well combined and warmed through.
  8. Transfer the mixture to a baking dish and spread it evenly.
  9. Sprinkle the remaining 1/2 cup of Gruyère over the top and bake for 30 minutes, until hot and bubbling. If the top isn’t nicely browned, broil on high for a few minutes—watch closely so the cheese doesn’t burn—to toast the Gruyère.

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Ingredients

  • 1 spaghetti squash
  • 2 tablespoons butter
  • 1 medium onion, finely diced
  • 3/4 cup plain Greek yogurt
  • 1 1/4 cup grated Gruyère cheese (divided)
  • 1 1/2 – 2 teaspoons sea salt (to taste)
  • 1/2 teaspoon black pepper
  • 1/4 teaspoon grated nutmeg

Instructions

  1. Preheat oven to 375 degrees F.
  2. Cut the squash in half lengthwise and place rind side up on a baking sheet. (If needed, microwave briefly to soften before baking.) Pour enough water into the pan to reach about 1/4 inch, bake for 45 minutes, and let cool.cut spaghetti squash
  3. Scoop out seeds and membranes from each half. I find this easiest after baking.baked spaghetti squash
  4. Shred the squash flesh with a fork and set aside.
  5. Melt butter in a medium/large pan.melting butter
  6. Sauté the diced onions until translucent, about 12 minutes. Stir in salt, pepper, and nutmeg.
  7. Add Greek yogurt, the shredded squash, and 3/4 cup Gruyère to the pan. Stir to combine and heat for a few minutes over medium heat.
  8. Transfer the mixture to a baking dish and spread evenly.spaghetti squash in baking dish
  9. Top with the remaining 1/2 cup grated Gruyère and bake for 30 minutes, until bubbling. Broil briefly if you want a golden, toasted top.

Serves 8–10

Enjoy!

Spaghetti Squash Gratin: PaleoSpirit.com

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